Meth1_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 16532903 lines in total Total number of methylation call strings processed: 33065806 Final Cytosine Methylation Report ================================= Total number of C's analysed: 470795105 Total methylated C's in CpG context: 3526671 Total methylated C's in CHG context: 1042497 Total methylated C's in CHH context: 4051822 Total C to T conversions in CpG context: 67569400 Total C to T conversions in CHG context: 83261569 Total C to T conversions in CHH context: 311343146 C methylated in CpG context: 5.0% C methylated in CHG context: 1.2% C methylated in CHH context: 1.3%