EF05-EM05-Zygote_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: strand-specific (default)
No overlapping methylation calls specified


Processed 3199072 lines in total
Total number of methylation call strings processed: 6398144

Final Cytosine Methylation Report
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Total number of C's analysed:	28591365

Total methylated C's in CpG context:	433213
Total methylated C's in CHG context:	84371
Total methylated C's in CHH context:	1439414

Total C to T conversions in CpG context:	2905613
Total C to T conversions in CHG context:	4576987
Total C to T conversions in CHH context:	19151767

C methylated in CpG context:	13.0%
C methylated in CHG context:	1.8%
C methylated in CHH context:	7.0%