EF04-EM04-Zygote_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: strand-specific (default)
No overlapping methylation calls specified


Processed 6882915 lines in total
Total number of methylation call strings processed: 13765830

Final Cytosine Methylation Report
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Total number of C's analysed:	67957021

Total methylated C's in CpG context:	1546006
Total methylated C's in CHG context:	497366
Total methylated C's in CHH context:	3097887

Total C to T conversions in CpG context:	7085137
Total C to T conversions in CHG context:	11636302
Total C to T conversions in CHH context:	44094323

C methylated in CpG context:	17.9%
C methylated in CHG context:	4.1%
C methylated in CHH context:	6.6%