CF05-CM02-Larvae_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 14427604 lines in total Total number of methylation call strings processed: 28855208 Final Cytosine Methylation Report ================================= Total number of C's analysed: 261975744 Total methylated C's in CpG context: 6990826 Total methylated C's in CHG context: 702897 Total methylated C's in CHH context: 3935709 Total C to T conversions in CpG context: 31782393 Total C to T conversions in CHG context: 53652034 Total C to T conversions in CHH context: 164911885 C methylated in CpG context: 18.0% C methylated in CHG context: 1.3% C methylated in CHH context: 2.3%