CF03-CM04-Larvae_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 13915567 lines in total Total number of methylation call strings processed: 27831134 Final Cytosine Methylation Report ================================= Total number of C's analysed: 286520198 Total methylated C's in CpG context: 7059413 Total methylated C's in CHG context: 662641 Total methylated C's in CHH context: 3451337 Total C to T conversions in CpG context: 32490932 Total C to T conversions in CHG context: 56079819 Total C to T conversions in CHH context: 186776056 C methylated in CpG context: 17.8% C methylated in CHG context: 1.2% C methylated in CHH context: 1.8%