Meth15_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 21166 lines in total Total number of methylation call strings processed: 42332 Final Cytosine Methylation Report ================================= Total number of C's analysed: 326605 Total methylated C's in CpG context: 1794 Total methylated C's in CHG context: 1507 Total methylated C's in CHH context: 13093 Total C to T conversions in CpG context: 84953 Total C to T conversions in CHG context: 89389 Total C to T conversions in CHH context: 135869 C methylated in CpG context: 2.1% C methylated in CHG context: 1.7% C methylated in CHH context: 8.8%