Meth14_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 10026 lines in total Total number of methylation call strings processed: 20052 Final Cytosine Methylation Report ================================= Total number of C's analysed: 155538 Total methylated C's in CpG context: 1069 Total methylated C's in CHG context: 765 Total methylated C's in CHH context: 5766 Total C to T conversions in CpG context: 40688 Total C to T conversions in CHG context: 44007 Total C to T conversions in CHH context: 63243 C methylated in CpG context: 2.6% C methylated in CHG context: 1.7% C methylated in CHH context: 8.4%