Meth11_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 1146 lines in total Total number of methylation call strings processed: 2292 Final Cytosine Methylation Report ================================= Total number of C's analysed: 16871 Total methylated C's in CpG context: 120 Total methylated C's in CHG context: 137 Total methylated C's in CHH context: 1229 Total C to T conversions in CpG context: 3560 Total C to T conversions in CHG context: 3890 Total C to T conversions in CHH context: 7935 C methylated in CpG context: 3.3% C methylated in CHG context: 3.4% C methylated in CHH context: 13.4%