EPI-185_S19_L003_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 2766273 lines in total Total number of methylation call strings processed: 5532546 Final Cytosine Methylation Report ================================= Total number of C's analysed: 57532394 Total methylated C's in CpG context: 2287343 Total methylated C's in CHG context: 323890 Total methylated C's in CHH context: 1768982 Total C to T conversions in CpG context: 5639671 Total C to T conversions in CHG context: 11658279 Total C to T conversions in CHH context: 35854229 C methylated in CpG context: 28.9% C methylated in CHG context: 2.7% C methylated in CHH context: 4.7%