EPI-143_S37_L005_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 7896079 lines in total Total number of methylation call strings processed: 15792158 Final Cytosine Methylation Report ================================= Total number of C's analysed: 180013500 Total methylated C's in CpG context: 6934397 Total methylated C's in CHG context: 872844 Total methylated C's in CHH context: 1579087 Total C to T conversions in CpG context: 17647358 Total C to T conversions in CHG context: 35893215 Total C to T conversions in CHH context: 117086599 C methylated in CpG context: 28.2% C methylated in CHG context: 2.4% C methylated in CHH context: 1.3%