Meth11_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 12310469 lines in total Total number of methylation call strings processed: 24620938 Final Cytosine Methylation Report ================================= Total number of C's analysed: 377810828 Total methylated C's in CpG context: 8270725 Total methylated C's in CHG context: 825804 Total methylated C's in CHH context: 2993041 Total C to T conversions in CpG context: 55024584 Total C to T conversions in CHG context: 66392410 Total C to T conversions in CHH context: 244304264 C methylated in CpG context: 13.1% C methylated in CHG context: 1.2% C methylated in CHH context: 1.2%