Meth10_R1_001_val_1_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 12586555 lines in total Total number of methylation call strings processed: 25173110 Final Cytosine Methylation Report ================================= Total number of C's analysed: 377801526 Total methylated C's in CpG context: 7711717 Total methylated C's in CHG context: 928481 Total methylated C's in CHH context: 3331314 Total C to T conversions in CpG context: 55397626 Total C to T conversions in CHG context: 65863241 Total C to T conversions in CHH context: 244569147 C methylated in CpG context: 12.2% C methylated in CHG context: 1.4% C methylated in CHH context: 1.3%