Meth15_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 5175033 lines in total Total number of methylation call strings processed: 10350066 Final Cytosine Methylation Report ================================= Total number of C's analysed: 159983384 Total methylated C's in CpG context: 1449841 Total methylated C's in CHG context: 307384 Total methylated C's in CHH context: 910660 Total C to T conversions in CpG context: 31590636 Total C to T conversions in CHG context: 29684065 Total C to T conversions in CHH context: 96040798 C methylated in CpG context: 4.4% C methylated in CHG context: 1.0% C methylated in CHH context: 0.9%