Meth14_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 5281175 lines in total Total number of methylation call strings processed: 10562350 Final Cytosine Methylation Report ================================= Total number of C's analysed: 154086972 Total methylated C's in CpG context: 1356663 Total methylated C's in CHG context: 189427 Total methylated C's in CHH context: 559778 Total C to T conversions in CpG context: 31324232 Total C to T conversions in CHG context: 29238281 Total C to T conversions in CHH context: 91418591 C methylated in CpG context: 4.2% C methylated in CHG context: 0.6% C methylated in CHH context: 0.6%