Meth13_R1_001_val_1_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 5475467 lines in total Total number of methylation call strings processed: 10950934 Final Cytosine Methylation Report ================================= Total number of C's analysed: 181531626 Total methylated C's in CpG context: 1607311 Total methylated C's in CHG context: 227141 Total methylated C's in CHH context: 675586 Total C to T conversions in CpG context: 35439173 Total C to T conversions in CHG context: 33460547 Total C to T conversions in CHH context: 110121868 C methylated in CpG context: 4.3% C methylated in CHG context: 0.7% C methylated in CHH context: 0.6%