CH03_04_S5_L001_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 7039 lines in total
Total number of methylation call strings processed: 14078

Final Cytosine Methylation Report
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Total number of C's analysed:	105194

Total methylated C's in CpG context:	1486
Total methylated C's in CHG context:	666
Total methylated C's in CHH context:	34756

Total C to T conversions in CpG context:	10447
Total C to T conversions in CHG context:	13065
Total C to T conversions in CHH context:	44774

C methylated in CpG context:	12.5%
C methylated in non-CpG context:	38.0%