Total number of alignments analysed in CH03_04_S5_L001_R1_001_val_1_bismark_bt2_pe.bam: 8170 Total number duplicated alignments removed: 1092 (13.37%) Duplicated alignments were found at: 866 different position(s) Total count of deduplicated leftover sequences: 7078 (86.63% of total)