CH03_04_S5_L001_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 7078 lines in total
Total number of methylation call strings processed: 14156

Final Cytosine Methylation Report
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Total number of C's analysed:	109311

Total methylated C's in CpG context:	1448
Total methylated C's in CHG context:	668
Total methylated C's in CHH context:	36515

Total C to T conversions in CpG context:	10823
Total C to T conversions in CHG context:	13419
Total C to T conversions in CHH context:	46438

C methylated in CpG context:	11.8%
C methylated in non-CpG context:	38.3%