CH09_28_S17_L001_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 8243 lines in total
Total number of methylation call strings processed: 16486

Final Cytosine Methylation Report
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Total number of C's analysed:	142621

Total methylated C's in CpG context:	14465
Total methylated C's in CHG context:	1035
Total methylated C's in CHH context:	15301

Total C to T conversions in CpG context:	6591
Total C to T conversions in CHG context:	27191
Total C to T conversions in CHH context:	78038

C methylated in CpG context:	68.7%
C methylated in non-CpG context:	13.4%