CH09_13_S16_L001_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 9540 lines in total
Total number of methylation call strings processed: 19080

Final Cytosine Methylation Report
=================================
Total number of C's analysed:	176643

Total methylated C's in CpG context:	9878
Total methylated C's in CHG context:	885
Total methylated C's in CHH context:	24028

Total C to T conversions in CpG context:	10065
Total C to T conversions in CHG context:	28745
Total C to T conversions in CHH context:	103042

C methylated in CpG context:	49.5%
C methylated in non-CpG context:	15.9%