CH05_06_S9_L001_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 5906 lines in total
Total number of methylation call strings processed: 11812

Final Cytosine Methylation Report
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Total number of C's analysed:	109463

Total methylated C's in CpG context:	1150
Total methylated C's in CHG context:	478
Total methylated C's in CHH context:	17607

Total C to T conversions in CpG context:	11937
Total C to T conversions in CHG context:	16737
Total C to T conversions in CHH context:	61554

C methylated in CpG context:	8.8%
C methylated in non-CpG context:	18.8%