Total number of alignments analysed in CH03_04_S5_L001_R1_001_val_1_bismark_bt2_pe.bam: 8475 Total number duplicated alignments removed: 1247 (14.71%) Duplicated alignments were found at: 944 different position(s) Total count of deduplicated leftover sequences: 7228 (85.29% of total)