CH01_38_S4_L001_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 9332 lines in total
Total number of methylation call strings processed: 18664

Final Cytosine Methylation Report
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Total number of C's analysed:	144393

Total methylated C's in CpG context:	14129
Total methylated C's in CHG context:	865
Total methylated C's in CHH context:	20560

Total C to T conversions in CpG context:	6281
Total C to T conversions in CHG context:	26198
Total C to T conversions in CHH context:	76360

C methylated in CpG context:	69.2%
C methylated in non-CpG context:	17.3%