CH01_06_S1_L001_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 9520 lines in total
Total number of methylation call strings processed: 19040

Final Cytosine Methylation Report
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Total number of C's analysed:	170858

Total methylated C's in CpG context:	21652
Total methylated C's in CHG context:	860
Total methylated C's in CHH context:	14743

Total C to T conversions in CpG context:	7081
Total C to T conversions in CHG context:	33856
Total C to T conversions in CHH context:	92666

C methylated in CpG context:	75.4%
C methylated in non-CpG context:	11.0%