zr3534_5_R1.fastp-trim.20201202_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 41935142 lines in total Total number of methylation call strings processed: 83870284 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1001853984 Total methylated C's in CpG context: 14205083 Total methylated C's in CHG context: 857017 Total methylated C's in CHH context: 3688422 Total C to T conversions in CpG context: 114075011 Total C to T conversions in CHG context: 172180736 Total C to T conversions in CHH context: 696847715 C methylated in CpG context: 11.1% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%