File Total Reads Aligned Reads Unaligned Reads Ambiguously Aligned Reads No Genomic Sequence Duplicate Reads (removed) Unique Reads (remaining) Total Cs Methylated CpGs Unmethylated CpGs Methylated chgs Unmethylated chgs Methylated CHHs Unmethylated CHHs Meth10.fastp-trim.202003063900_R1_001_bismark_bt2_pe.bam 10000000 4073989 4329790 1596139 82 1456172 2617817 80580668 1649397 11904013 206880 14168045 706517 51945816 Meth11.fastp-trim.202003065734_R1_001_bismark_bt2_pe.bam 10000000 4218863 4154265 1626785 87 1356897 2861966 88951193 1951201 13048095 205273 15756045 715458 57275121 Meth12.fastp-trim.202003060645_R1_001_bismark_bt2_pe.bam 10000000 4108807 4447619 1443529 45 1254196 2854611 92003174 2032566 13280062 237175 16044599 783185 59625587 Meth16.fastp-trim.202003062412_R1_001_bismark_bt2_pe.bam 10000000 2520084 6429479 1050390 47 1014188 1505896 45634032 1227419 6446014 133547 7940666 453750 29432636 Meth17.fastp-trim.202003063731_R1_001_bismark_bt2_pe.bam 10000000 2476279 6446159 1077522 40 1206910 1269369 36225404 895491 5311034 102741 6341287 366553 23208298 Meth18.fastp-trim.202003065117_R1_001_bismark_bt2_pe.bam 10000000 2380469 6684636 934856 39 1213229 1167240 34775504 821874 5079769 96240 6056110 342328 22379183