CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 1558257 22859277 6.38 24417534 2 25474237 558497 97.85 26032734 3 2854 95187 2.91 98041 4 20667 905149 2.23 925816 5 44541 1668301 2.60 1712842 6 57498 1652651 3.36 1710149 7 80737 1920112 4.04 2000849 8 83711 2053745 3.92 2137456 9 91592 2143886 4.10 2235478 10 97844 2257699 4.15 2355543 11 92678 2147671 4.14 2240349 12 79129 1929438 3.94 2008567 13 72044 1840103 3.77 1912147 14 80656 2132608 3.64 2213264 15 90598 2370223 3.68 2460821 16 122362 2416291 4.82 2538653 17 89968 2282399 3.79 2372367 18 79036 2071851 3.67 2150887 19 76156 1981706 3.70 2057862 20 82994 2059229 3.87 2142223 21 95283 2041178 4.46 2136461 22 95067 1877874 4.82 1972941 23 106228 2065028 4.89 2171256 24 107784 2083163 4.92 2190947 25 107344 2062865 4.95 2170209 26 122478 2120421 5.46 2242899 27 124539 2034622 5.77 2159161 28 118537 1916689 5.82 2035226 29 118833 1872919 5.97 1991752 30 135254 1967278 6.43 2102532 31 149338 2010554 6.91 2159892 32 156629 1983789 7.32 2140418 33 154410 2028730 7.07 2183140 34 162573 2089753 7.22 2252326 35 164211 1990361 7.62 2154572 36 162014 1906108 7.83 2068122 37 161706 1938592 7.70 2100298 38 152962 1836522 7.69 1989484 39 156808 1906994 7.60 2063802 40 181553 1972104 8.43 2153657 41 174367 1857983 8.58 2032350 42 176329 1829242 8.79 2005571 43 187324 1777045 9.54 1964369 44 162112 1823408 8.16 1985520 45 163284 1827312 8.20 1990596 46 164099 1974578 7.67 2138677 47 165361 2107820 7.27 2273181 48 157384 1965622 7.41 2123006 49 177556 1863944 8.70 2041500 50 183119 1884607 8.86 2067726 51 176170 1761794 9.09 1937964 52 186975 1845603 9.20 2032578 53 170840 1850229 8.45 2021069 54 176173 1761571 9.09 1937744 55 190013 1703699 10.03 1893712 56 189292 1704476 10.00 1893768 57 167770 1731869 8.83 1899639 58 193919 1754731 9.95 1948650 59 185013 1822992 9.21 2008005 60 195668 1778243 9.91 1973911 61 176255 1730469 9.24 1906724 62 180926 1790051 9.18 1970977 63 185081 1810802 9.27 1995883 64 187910 1772930 9.58 1960840 65 173382 1761443 8.96 1934825 66 183695 1677265 9.87 1860960 67 177024 1761384 9.13 1938408 68 175193 1665557 9.52 1840750 69 188002 1612587 10.44 1800589 70 177434 1648067 9.72 1825501 71 183533 1653272 9.99 1836805 72 219921 1703680 11.43 1923601 73 194731 1757817 9.97 1952548 74 184212 1662809 9.97 1847021 75 209091 1625504 11.40 1834595 76 239715 1734801 12.14 1974516 77 210307 1720276 10.89 1930583 78 227758 1602333 12.45 1830091 79 248576 1620596 13.30 1869172 80 195814 1641841 10.66 1837655 81 203380 1500846 11.93 1704226 82 176458 1480935 10.65 1657393 83 168357 1459215 10.34 1627572 84 170881 1443845 10.58 1614726 85 174958 1512326 10.37 1687284 86 173641 1548841 10.08 1722482 87 175050 1475842 10.60 1650892 88 196736 1433941 12.06 1630677 89 212341 1410124 13.09 1622465 90 172318 1433398 10.73 1605716 91 225587 1495680 13.11 1721267 92 201939 1494488 11.90 1696427 93 174179 1378757 11.22 1552936 94 185803 1413005 11.62 1598808 95 247594 1426352 14.79 1673946 96 192154 1410689 11.99 1602843 97 181730 1336716 11.97 1518446 98 190664 1348449 12.39 1539113 99 180251 1347976 11.79 1528227 100 227147 1313526 14.74 1540673 101 166183 1384498 10.72 1550681 102 148760 1339216 10.00 1487976 103 170148 1277338 11.75 1447486 104 161321 1251409 11.42 1412730 105 147841 1232703 10.71 1380544 106 158776 1196668 11.71 1355444 107 147745 1209047 10.89 1356792 108 180764 1174506 13.34 1355270 109 208454 1220128 14.59 1428582 110 151676 1214778 11.10 1366454 111 158151 1119843 12.37 1277994 112 161998 1206351 11.84 1368349 113 147168 1198168 10.94 1345336 114 145258 1115145 11.52 1260403 115 140539 1152099 10.87 1292638 116 139059 1151898 10.77 1290957 117 148502 1139700 11.53 1288202 118 139460 1139826 10.90 1279286 119 137272 1107825 11.03 1245097 120 142402 1089946 11.56 1232348 121 194257 1116781 14.82 1311038 122 139111 1251633 10.00 1390744 123 128961 1198874 9.71 1327835 124 135446 1113815 10.84 1249261 125 142057 1075192 11.67 1217249 126 129809 1104500 10.52 1234309 127 135276 1234623 9.87 1369899 128 137461 1221727 10.11 1359188 129 131114 1079987 10.83 1211101 130 137598 1082300 11.28 1219898 131 135515 1035929 11.57 1171444 132 126570 1016683 11.07 1143253 133 123226 1030736 10.68 1153962 134 124531 1070933 10.42 1195464 135 132968 1106847 10.72 1239815 136 132969 1048778 11.25 1181747 137 139489 990263 12.35 1129752 138 211909 994846 17.56 1206755 139 142175 1079961 11.63 1222136 140 132836 983668 11.90 1116504 141 131271 1007275 11.53 1138546 142 136449 1024707 11.75 1161156 143 126034 1002674 11.17 1128708 144 119517 951980 11.15 1071497 145 126415 930725 11.96 1057140 146 205922 931964 18.10 1137886 147 130733 984054 11.73 1114787 148 121235 885512 12.04 1006747 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 29902 297006 9.15 326908 2 328195 14702 95.71 342897 3 399065 25781431 1.52 26180496 4 3545 757520 0.47 761065 5 4208 780897 0.54 785105 6 12901 1447567 0.88 1460468 7 14408 1775297 0.81 1789705 8 15643 1539494 1.01 1555137 9 15341 1881804 0.81 1897145 10 15961 1766651 0.90 1782612 11 14973 1855470 0.80 1870443 12 15607 1868832 0.83 1884439 13 16695 1950452 0.85 1967147 14 14924 1818917 0.81 1833841 15 16058 1998253 0.80 2014311 16 15676 1914204 0.81 1929880 17 17423 2011947 0.86 2029370 18 16875 2027079 0.83 2043954 19 16856 1965350 0.85 1982206 20 16626 1877835 0.88 1894461 21 16345 1963185 0.83 1979530 22 16440 1834343 0.89 1850783 23 18654 2059000 0.90 2077654 24 15677 1750416 0.89 1766093 25 17045 1813733 0.93 1830778 26 16774 1740480 0.95 1757254 27 16691 1843123 0.90 1859814 28 15108 1809362 0.83 1824470 29 17244 1905516 0.90 1922760 30 19141 2045729 0.93 2064870 31 17324 1912807 0.90 1930131 32 17742 1916940 0.92 1934682 33 17467 1840287 0.94 1857754 34 17025 1906971 0.88 1923996 35 16385 1852215 0.88 1868600 36 17583 1866237 0.93 1883820 37 16973 1861571 0.90 1878544 38 15928 1725478 0.91 1741406 39 18222 1858629 0.97 1876851 40 15840 1713251 0.92 1729091 41 17142 1796119 0.95 1813261 42 17539 1818640 0.96 1836179 43 17233 1795876 0.95 1813109 44 15976 1703425 0.93 1719401 45 17895 1857792 0.95 1875687 46 15756 1702517 0.92 1718273 47 17390 1849356 0.93 1866746 48 15930 1734819 0.91 1750749 49 18637 1916040 0.96 1934677 50 16840 1771012 0.94 1787852 51 17164 1737753 0.98 1754917 52 16672 1689743 0.98 1706415 53 16205 1661851 0.97 1678056 54 16309 1653185 0.98 1669494 55 17345 1771062 0.97 1788407 56 16778 1670787 0.99 1687565 57 17250 1805363 0.95 1822613 58 19277 1848018 1.03 1867295 59 18557 1765728 1.04 1784285 60 18006 1744845 1.02 1762851 61 16892 1672120 1.00 1689012 62 16339 1576141 1.03 1592480 63 17387 1668541 1.03 1685928 64 16446 1588657 1.02 1605103 65 17078 1625013 1.04 1642091 66 16485 1593224 1.02 1609709 67 16739 1594669 1.04 1611408 68 16744 1599590 1.04 1616334 69 16342 1508461 1.07 1524803 70 15509 1562982 0.98 1578491 71 16219 1489483 1.08 1505702 72 16728 1501790 1.10 1518518 73 14920 1412898 1.04 1427818 74 15759 1455630 1.07 1471389 75 16962 1481729 1.13 1498691 76 18033 1590545 1.12 1608578 77 17185 1493039 1.14 1510224 78 20028 1599324 1.24 1619352 79 17953 1513008 1.17 1530961 80 16636 1490788 1.10 1507424 81 16359 1483140 1.09 1499499 82 15633 1484727 1.04 1500360 83 15331 1408062 1.08 1423393 84 15135 1363630 1.10 1378765 85 15043 1349993 1.10 1365036 86 14102 1293074 1.08 1307176 87 15508 1410219 1.09 1425727 88 17241 1435494 1.19 1452735 89 20213 1388528 1.43 1408741 90 16564 1461123 1.12 1477687 91 15551 1306739 1.18 1322290 92 16064 1335582 1.19 1351646 93 16064 1370477 1.16 1386541 94 16266 1327547 1.21 1343813 95 16967 1320337 1.27 1337304 96 15643 1327312 1.16 1342955 97 16505 1403995 1.16 1420500 98 14611 1251536 1.15 1266147 99 16531 1389141 1.18 1405672 100 14524 1179917 1.22 1194441 101 13595 1173694 1.15 1187289 102 13333 1183406 1.11 1196739 103 13922 1230141 1.12 1244063 104 13057 1135272 1.14 1148329 105 13875 1258598 1.09 1272473 106 13122 1112955 1.17 1126077 107 13608 1179731 1.14 1193339 108 15380 1199674 1.27 1215054 109 13352 1122398 1.18 1135750 110 13825 1193769 1.14 1207594 111 14371 1168314 1.22 1182685 112 13510 1142188 1.17 1155698 113 12234 1074126 1.13 1086360 114 13334 1135106 1.16 1148440 115 12546 1073124 1.16 1085670 116 12894 1130845 1.13 1143739 117 12841 1122717 1.13 1135558 118 12171 1114955 1.08 1127126 119 12261 1044520 1.16 1056781 120 12709 1066844 1.18 1079553 121 12069 1048441 1.14 1060510 122 11826 970266 1.20 982092 123 12094 1021787 1.17 1033881 124 11743 1008269 1.15 1020012 125 11743 1050938 1.11 1062681 126 12446 1121291 1.10 1133737 127 12059 1030788 1.16 1042847 128 11573 1022084 1.12 1033657 129 12485 1036697 1.19 1049182 130 11569 997609 1.15 1009178 131 11481 956522 1.19 968003 132 10869 953005 1.13 963874 133 10840 936347 1.14 947187 134 10526 965284 1.08 975810 135 10542 939001 1.11 949543 136 11865 937181 1.25 949046 137 12555 985086 1.26 997641 138 11877 902363 1.30 914240 139 10247 887060 1.14 897307 140 10925 916056 1.18 926981 141 10659 895994 1.18 906653 142 11006 872397 1.25 883403 143 9484 858650 1.09 868134 144 10305 891318 1.14 901623 145 11842 914824 1.28 926666 146 11107 837304 1.31 848411 147 10293 841438 1.21 851731 148 10153 858709 1.17 868862 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 15957 103907 13.31 119864 2 126535 17845 87.64 144380 3 43266 411805 9.51 455071 4 97425 8419182 1.14 8516607 5 90053 7279313 1.22 7369366 6 76735 6635592 1.14 6712327 7 73550 6453962 1.13 6527512 8 77126 6502759 1.17 6579885 9 76334 6653226 1.13 6729560 10 81787 6748113 1.20 6829900 11 78585 6601811 1.18 6680396 12 81638 7374559 1.09 7456197 13 82683 7036760 1.16 7119443 14 76600 6828476 1.11 6905076 15 77608 6800491 1.13 6878099 16 81007 6975993 1.15 7057000 17 77179 6845062 1.11 6922241 18 79017 7027082 1.11 7106099 19 82745 7110762 1.15 7193507 20 79880 6924764 1.14 7004644 21 77250 6836886 1.12 6914136 22 78820 6906118 1.13 6984938 23 73449 6691372 1.09 6764821 24 71030 6551215 1.07 6622245 25 75892 7061412 1.06 7137304 26 72338 7126650 1.00 7198988 27 70305 6826509 1.02 6896814 28 62768 6554248 0.95 6617016 29 64446 6724764 0.95 6789210 30 65909 6871363 0.95 6937272 31 61407 6562668 0.93 6624075 32 63551 6758739 0.93 6822290 33 60579 6748787 0.89 6809366 34 61031 6949646 0.87 7010677 35 57376 6709717 0.85 6767093 36 53713 6349820 0.84 6403533 37 54681 6509606 0.83 6564287 38 55063 6406765 0.85 6461828 39 55085 6544934 0.83 6600019 40 57762 6794656 0.84 6852418 41 53160 6316069 0.83 6369229 42 57326 6571463 0.86 6628789 43 55782 6559339 0.84 6615121 44 54125 6274241 0.86 6328366 45 54949 6353757 0.86 6408706 46 54127 6282837 0.85 6336964 47 53254 6102443 0.87 6155697 48 52415 6008444 0.86 6060859 49 51730 5914078 0.87 5965808 50 55660 6181112 0.89 6236772 51 57948 6536269 0.88 6594217 52 55298 6391508 0.86 6446806 53 56339 6434029 0.87 6490368 54 53021 6114450 0.86 6167471 55 54107 6134587 0.87 6188694 56 53197 6032447 0.87 6085644 57 52988 6019603 0.87 6072591 58 52609 5980802 0.87 6033411 59 51502 5824833 0.88 5876335 60 52948 5742254 0.91 5795202 61 50685 5574172 0.90 5624857 62 53399 5962096 0.89 6015495 63 53380 5959286 0.89 6012666 64 51885 5769340 0.89 5821225 65 49541 5517145 0.89 5566686 66 48801 5412411 0.89 5461212 67 50522 5646269 0.89 5696791 68 50439 5562021 0.90 5612460 69 51452 5739662 0.89 5791114 70 50733 5588334 0.90 5639067 71 49824 5466853 0.90 5516677 72 49882 5487986 0.90 5537868 73 48721 5388438 0.90 5437159 74 49046 5469324 0.89 5518370 75 47317 5207495 0.90 5254812 76 48606 5307353 0.91 5355959 77 49459 5370580 0.91 5420039 78 49476 5370849 0.91 5420325 79 46829 5130045 0.90 5176874 80 46192 5017546 0.91 5063738 81 44338 4848159 0.91 4892497 82 45222 4948367 0.91 4993589 83 45378 5004759 0.90 5050137 84 45837 5082009 0.89 5127846 85 45772 4976273 0.91 5022045 86 44305 4874531 0.90 4918836 87 46293 5057288 0.91 5103581 88 44068 4812061 0.91 4856129 89 43566 4731024 0.91 4774590 90 40341 4508174 0.89 4548515 91 41839 4521083 0.92 4562922 92 41513 4503154 0.91 4544667 93 42571 4588346 0.92 4630917 94 41792 4519414 0.92 4561206 95 42487 4671378 0.90 4713865 96 41217 4572750 0.89 4613967 97 41028 4580693 0.89 4621721 98 40008 4401228 0.90 4441236 99 40166 4484633 0.89 4524799 100 38296 4209432 0.90 4247728 101 39153 4280934 0.91 4320087 102 38144 4269001 0.89 4307145 103 38135 4240614 0.89 4278749 104 38478 4307549 0.89 4346027 105 39248 4352953 0.89 4392201 106 37694 4196096 0.89 4233790 107 37975 4146805 0.91 4184780 108 37436 4128845 0.90 4166281 109 35680 3959802 0.89 3995482 110 36201 3948522 0.91 3984723 111 35560 3927473 0.90 3963033 112 35742 3946015 0.90 3981757 113 35181 3958520 0.88 3993701 114 35809 3949949 0.90 3985758 115 35918 3974947 0.90 4010865 116 34076 3827499 0.88 3861575 117 33750 3774022 0.89 3807772 118 34890 4027590 0.86 4062480 119 34821 3852615 0.90 3887436 120 33089 3678244 0.89 3711333 121 32491 3607499 0.89 3639990 122 31549 3613487 0.87 3645036 123 31790 3574564 0.88 3606354 124 32039 3572528 0.89 3604567 125 30890 3400061 0.90 3430951 126 31302 3447877 0.90 3479179 127 30102 3423941 0.87 3454043 128 31436 3592087 0.87 3623523 129 30922 3486563 0.88 3517485 130 30616 3366022 0.90 3396638 131 30119 3362558 0.89 3392677 132 31034 3461840 0.89 3492874 133 30694 3398022 0.90 3428716 134 31211 3378474 0.92 3409685 135 28980 3273375 0.88 3302355 136 28353 3287938 0.85 3316291 137 27347 3161542 0.86 3188889 138 27874 3191216 0.87 3219090 139 28173 3207925 0.87 3236098 140 27609 3119412 0.88 3147021 141 27949 3116024 0.89 3143973 142 26620 3039008 0.87 3065628 143 26958 3019611 0.88 3046569 144 27388 3051533 0.89 3078921 145 26627 3003877 0.88 3030504 146 26293 2942158 0.89 2968451 147 26828 3045826 0.87 3072654 148 26404 2893466 0.90 2919870 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 2749 69890 3.78 72639 2 7200 432972 1.64 440172 3 18163 718361 2.47 736524 4 25556 717292 3.44 742848 5 32823 768356 4.10 801179 6 34793 818175 4.08 852968 7 43729 914180 4.57 957909 8 44292 888847 4.75 933139 9 33926 801106 4.06 835032 10 29464 731984 3.87 761448 11 28725 687257 4.01 715982 12 30832 848089 3.51 878921 13 33535 894250 3.61 927785 14 49774 980810 4.83 1030584 15 42251 913789 4.42 956040 16 29911 756059 3.81 785970 17 27308 694649 3.78 721957 18 26665 686815 3.74 713480 19 28811 684260 4.04 713071 20 28010 667780 4.03 695790 21 29785 737786 3.88 767571 22 31531 752674 4.02 784205 23 26691 716620 3.59 743311 24 28062 701805 3.84 729867 25 27142 660627 3.95 687769 26 23060 627168 3.55 650228 27 23781 633720 3.62 657501 28 27016 633681 4.09 660697 29 26154 638668 3.93 664822 30 23920 608713 3.78 632633 31 23802 609276 3.76 633078 32 24507 621811 3.79 646318 33 24892 580712 4.11 605604 34 24439 598631 3.92 623070 35 23833 598965 3.83 622798 36 22143 564931 3.77 587074 37 27173 603627 4.31 630800 38 27557 600723 4.39 628280 39 22804 590527 3.72 613331 40 22053 563721 3.76 585774 41 18923 525121 3.48 544044 42 19527 509652 3.69 529179 43 19045 495035 3.70 514080 44 18145 519139 3.38 537284 45 19711 530494 3.58 550205 46 18913 505251 3.61 524164 47 21397 533656 3.85 555053 48 22623 536261 4.05 558884 49 19454 508465 3.69 527919 50 19704 540534 3.52 560238 51 19073 515888 3.57 534961 52 18265 471568 3.73 489833 53 18089 445539 3.90 463628 54 17491 442044 3.81 459535 55 17037 448445 3.66 465482 56 17847 461666 3.72 479513 57 17891 485361 3.56 503252 58 16472 450837 3.52 467309 59 17255 455901 3.65 473156 60 19949 490487 3.91 510436 61 19129 486364 3.78 505493 62 16828 480660 3.38 497488 63 16413 462484 3.43 478897 64 15374 433789 3.42 449163 65 15364 462765 3.21 478129 66 15626 443538 3.40 459164 67 15243 420344 3.50 435587 68 15163 407394 3.59 422557 69 14804 409305 3.49 424109 70 14300 413498 3.34 427798 71 14267 417266 3.31 431533 72 14040 391245 3.46 405285 73 13294 389153 3.30 402447 74 22136 494267 4.29 516403 75 22523 482195 4.46 504718 76 15452 405035 3.67 420487 77 14804 403879 3.54 418683 78 15274 400786 3.67 416060 79 13104 354818 3.56 367922 80 12403 348907 3.43 361310 81 12308 340212 3.49 352520 82 12301 338407 3.51 350708 83 12276 349672 3.39 361948 84 12837 342370 3.61 355207 85 13155 327903 3.86 341058 86 12793 324380 3.79 337173 87 12020 324806 3.57 336826 88 12368 323262 3.69 335630 89 13786 350335 3.79 364121 90 13732 331832 3.97 345564 91 10081 294485 3.31 304566 92 10513 309231 3.29 319744 93 11122 314453 3.42 325575 94 10317 292673 3.41 302990 95 9939 281599 3.41 291538 96 10055 280297 3.46 290352 97 9600 281036 3.30 290636 98 9466 270549 3.38 280015 99 9655 273470 3.41 283125 100 9374 268164 3.38 277538 101 9341 268115 3.37 277456 102 9345 262708 3.43 272053 103 9178 256248 3.46 265426 104 8714 258417 3.26 267131 105 8800 258693 3.29 267493 106 9077 258053 3.40 267130 107 8555 250149 3.31 258704 108 8537 245039 3.37 253576 109 8420 237511 3.42 245931 110 8800 245720 3.46 254520 111 8845 237542 3.59 246387 112 8459 233372 3.50 241831 113 8704 237018 3.54 245722 114 8385 239016 3.39 247401 115 8309 229440 3.49 237749 116 7663 222300 3.33 229963 117 7493 218905 3.31 226398 118 8056 226732 3.43 234788 119 8136 226337 3.47 234473 120 7182 213516 3.25 220698 121 7270 219288 3.21 226558 122 7543 216129 3.37 223672 123 7732 209211 3.56 216943 124 7509 209647 3.46 217156 125 7337 205195 3.45 212532 126 7006 201044 3.37 208050 127 7076 195412 3.49 202488 128 6786 197741 3.32 204527 129 6836 197929 3.34 204765 130 7203 197780 3.51 204983 131 6918 196964 3.39 203882 132 6828 194454 3.39 201282 133 7123 190688 3.60 197811 134 6506 186449 3.37 192955 135 6349 181655 3.38 188004 136 6077 174803 3.36 180880 137 6267 172513 3.51 178780 138 5981 174203 3.32 180184 139 5856 173161 3.27 179017 140 6110 176338 3.35 182448 141 5927 175303 3.27 181230 142 5402 170858 3.06 176260 143 5394 166973 3.13 172367 144 5887 163582 3.47 169469 145 6013 162798 3.56 168811 146 5776 156272 3.56 162048 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 206067 10239971 1.97 10446038 2 2190 398878 0.55 401068 3 1811 363553 0.50 365364 4 6637 636760 1.03 643397 5 6783 720275 0.93 727058 6 7198 638922 1.11 646120 7 7005 720442 0.96 727447 8 7256 709067 1.01 716323 9 6444 681445 0.94 687889 10 6978 728297 0.95 735275 11 6202 703138 0.87 709340 12 6138 656346 0.93 662484 13 7033 836338 0.83 843371 14 7036 818720 0.85 825756 15 7011 739109 0.94 746120 16 8009 814526 0.97 822535 17 7377 725657 1.01 733034 18 6432 639380 1.00 645812 19 6006 697639 0.85 703645 20 5595 601040 0.92 606635 21 6460 645704 0.99 652164 22 5587 616428 0.90 622015 23 5216 586598 0.88 591814 24 5410 583252 0.92 588662 25 5311 572295 0.92 577606 26 5145 586508 0.87 591653 27 5038 603379 0.83 608417 28 5909 683479 0.86 689388 29 5391 626165 0.85 631556 30 5753 666513 0.86 672266 31 5802 601143 0.96 606945 32 5541 617493 0.89 623034 33 4794 544964 0.87 549758 34 4874 559322 0.86 564196 35 4884 579861 0.84 584745 36 4955 542780 0.90 547735 37 5371 566697 0.94 572068 38 4906 555378 0.88 560284 39 4458 506642 0.87 511100 40 4943 560569 0.87 565512 41 4099 502324 0.81 506423 42 4302 489693 0.87 493995 43 4445 512310 0.86 516755 44 3902 479303 0.81 483205 45 4133 505956 0.81 510089 46 4162 493709 0.84 497871 47 4491 519171 0.86 523662 48 4251 524169 0.80 528420 49 4348 482114 0.89 486462 50 4503 510309 0.87 514812 51 3753 463467 0.80 467220 52 3901 464133 0.83 468034 53 4161 470898 0.88 475059 54 3767 447099 0.84 450866 55 4001 458944 0.86 462945 56 4037 489681 0.82 493718 57 3634 436427 0.83 440061 58 3790 441233 0.85 445023 59 3476 422446 0.82 425922 60 3431 407670 0.83 411101 61 3783 435427 0.86 439210 62 3237 405279 0.79 408516 63 3399 414664 0.81 418063 64 3278 405283 0.80 408561 65 3179 395998 0.80 399177 66 3110 373969 0.82 377079 67 3171 399492 0.79 402663 68 3148 394022 0.79 397170 69 3130 381478 0.81 384608 70 3236 398595 0.81 401831 71 2832 358025 0.78 360857 72 2797 354597 0.78 357394 73 2840 355006 0.79 357846 74 2939 394122 0.74 397061 75 3006 379983 0.78 382989 76 3116 365618 0.85 368734 77 3058 380330 0.80 383388 78 2733 346196 0.78 348929 79 2945 361282 0.81 364227 80 2714 331980 0.81 334694 81 2785 342749 0.81 345534 82 2573 323526 0.79 326099 83 2320 318175 0.72 320495 84 2334 298453 0.78 300787 85 2489 324073 0.76 326562 86 2607 332529 0.78 335136 87 3215 310272 1.03 313487 88 2586 334357 0.77 336943 89 2354 297334 0.79 299688 90 2433 297414 0.81 299847 91 2162 288032 0.75 290194 92 2159 284523 0.75 286682 93 2119 272812 0.77 274931 94 2204 281394 0.78 283598 95 2117 275572 0.76 277689 96 2039 260191 0.78 262230 97 2064 269312 0.76 271376 98 1773 255579 0.69 257352 99 1921 254979 0.75 256900 100 1813 255366 0.70 257179 101 1880 252516 0.74 254396 102 1994 255799 0.77 257793 103 2016 262480 0.76 264496 104 2016 245612 0.81 247628 105 1726 247056 0.69 248782 106 1918 253587 0.75 255505 107 1834 244459 0.74 246293 108 1807 244299 0.73 246106 109 1980 250256 0.78 252236 110 1750 226988 0.77 228738 111 1648 230188 0.71 231836 112 1659 235570 0.70 237229 113 1659 218770 0.75 220429 114 1689 226832 0.74 228521 115 1575 218365 0.72 219940 116 1609 223900 0.71 225509 117 1601 206313 0.77 207914 118 1582 212310 0.74 213892 119 1593 209098 0.76 210691 120 1522 207496 0.73 209018 121 1483 202693 0.73 204176 122 1409 198372 0.71 199781 123 1632 200496 0.81 202128 124 1422 199322 0.71 200744 125 1312 199227 0.65 200539 126 1374 191899 0.71 193273 127 1416 196852 0.71 198268 128 1344 187439 0.71 188783 129 1407 186360 0.75 187767 130 1332 185523 0.71 186855 131 1336 177939 0.75 179275 132 1277 184649 0.69 185926 133 1224 177431 0.69 178655 134 1271 174100 0.72 175371 135 1286 173985 0.73 175271 136 1278 171016 0.74 172294 137 1201 170697 0.70 171898 138 1187 164261 0.72 165448 139 1219 169608 0.71 170827 140 1180 159597 0.73 160777 141 1152 162202 0.71 163354 142 1113 157137 0.70 158250 143 1064 157083 0.67 158147 144 1042 151708 0.68 152750 145 1198 154307 0.77 155505 146 1049 147451 0.71 148500 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8948 230245 3.74 239193 2 39083 3486896 1.11 3525979 3 34893 3031980 1.14 3066873 4 26445 2712289 0.97 2738734 5 24686 2632890 0.93 2657576 6 26026 2682217 0.96 2708243 7 29213 3054489 0.95 3083702 8 25611 2620127 0.97 2645738 9 24517 2632012 0.92 2656529 10 27725 2849375 0.96 2877100 11 27274 2788787 0.97 2816061 12 24352 2795112 0.86 2819464 13 24227 2824152 0.85 2848379 14 23342 2605463 0.89 2628805 15 24224 2698081 0.89 2722305 16 23838 2663896 0.89 2687734 17 24926 2673496 0.92 2698422 18 23493 2538462 0.92 2561955 19 21199 2364570 0.89 2385769 20 23339 2495213 0.93 2518552 21 23515 2585183 0.90 2608698 22 22824 2428646 0.93 2451470 23 22629 2530865 0.89 2553494 24 22364 2489953 0.89 2512317 25 22047 2419265 0.90 2441312 26 20189 2331626 0.86 2351815 27 20433 2348008 0.86 2368441 28 20572 2383770 0.86 2404342 29 21235 2320944 0.91 2342179 30 21639 2254023 0.95 2275662 31 20370 2239578 0.90 2259948 32 20781 2266904 0.91 2287685 33 18674 2190429 0.85 2209103 34 18687 2096228 0.88 2114915 35 19234 2145823 0.89 2165057 36 20114 2160715 0.92 2180829 37 18677 2077605 0.89 2096282 38 19746 2137862 0.92 2157608 39 16740 1961489 0.85 1978229 40 17178 2031005 0.84 2048183 41 17288 2018553 0.85 2035841 42 16174 1886187 0.85 1902361 43 17156 2012800 0.85 2029956 44 17529 2033730 0.85 2051259 45 15478 1861299 0.82 1876777 46 15443 1810592 0.85 1826035 47 15314 1773591 0.86 1788905 48 17014 1935721 0.87 1952735 49 16867 2055830 0.81 2072697 50 16329 1977646 0.82 1993975 51 16420 1885279 0.86 1901699 52 15940 1932154 0.82 1948094 53 14632 1763915 0.82 1778547 54 14534 1708010 0.84 1722544 55 14830 1786236 0.82 1801066 56 14989 1843256 0.81 1858245 57 14669 1792333 0.81 1807002 58 13588 1618875 0.83 1632463 59 13010 1570121 0.82 1583131 60 14550 1744247 0.83 1758797 61 13967 1698789 0.82 1712756 62 13014 1607690 0.80 1620704 63 13395 1624511 0.82 1637906 64 12612 1585428 0.79 1598040 65 12922 1633103 0.79 1646025 66 12626 1560759 0.80 1573385 67 13134 1607231 0.81 1620365 68 13083 1618346 0.80 1631429 69 12270 1529603 0.80 1541873 70 12327 1525868 0.80 1538195 71 11905 1544187 0.77 1556092 72 12970 1612087 0.80 1625057 73 11134 1404626 0.79 1415760 74 11339 1384101 0.81 1395440 75 11071 1373846 0.80 1384917 76 12102 1511727 0.79 1523829 77 10598 1362485 0.77 1373083 78 10418 1319947 0.78 1330365 79 10011 1252653 0.79 1262664 80 10252 1336545 0.76 1346797 81 11218 1380837 0.81 1392055 82 10119 1338419 0.75 1348538 83 10165 1324436 0.76 1334601 84 9352 1212920 0.77 1222272 85 10212 1287136 0.79 1297348 86 9285 1192410 0.77 1201695 87 9604 1232982 0.77 1242586 88 8839 1144517 0.77 1153356 89 8747 1141956 0.76 1150703 90 8568 1124175 0.76 1132743 91 9160 1185237 0.77 1194397 92 8561 1133808 0.75 1142369 93 9230 1169688 0.78 1178918 94 8996 1170390 0.76 1179386 95 8229 1068635 0.76 1076864 96 7925 1076831 0.73 1084756 97 7874 1055391 0.74 1063265 98 7577 987089 0.76 994666 99 7512 986259 0.76 993771 100 7810 1024742 0.76 1032552 101 7713 1012240 0.76 1019953 102 7332 981186 0.74 988518 103 6884 966551 0.71 973435 104 7201 960184 0.74 967385 105 7140 957094 0.74 964234 106 6887 947019 0.72 953906 107 6672 900213 0.74 906885 108 6697 903917 0.74 910614 109 6640 887471 0.74 894111 110 6648 885960 0.74 892608 111 6428 878332 0.73 884760 112 6434 865725 0.74 872159 113 6366 869622 0.73 875988 114 6316 849159 0.74 855475 115 6088 839265 0.72 845353 116 6133 831579 0.73 837712 117 6190 833677 0.74 839867 118 5771 796310 0.72 802081 119 5724 799710 0.71 805434 120 5851 786581 0.74 792432 121 5456 760582 0.71 766038 122 5463 772391 0.70 777854 123 5418 756169 0.71 761587 124 5349 755626 0.70 760975 125 5313 740474 0.71 745787 126 5105 735142 0.69 740247 127 5247 729422 0.71 734669 128 5081 714821 0.71 719902 129 5008 706109 0.70 711117 130 5125 703551 0.72 708676 131 4832 686623 0.70 691455 132 4621 666339 0.69 670960 133 4702 678792 0.69 683494 134 4809 659567 0.72 664376 135 4616 650363 0.70 654979 136 4460 654333 0.68 658793 137 4532 643607 0.70 648139 138 4493 640310 0.70 644803 139 4506 636607 0.70 641113 140 4426 617300 0.71 621726 141 4184 596031 0.70 600215 142 4255 612469 0.69 616724 143 4082 609031 0.67 613113 144 4116 592191 0.69 596307 145 4111 595411 0.69 599522 146 4064 580824 0.69 584888