Meth15.fastp-trim.202003065503_R1_001_bismark_bt2_pe.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Ignoring first 2 bp of Read 2 Output specified: strand-specific (default) No overlapping methylation calls specified Processed 53148183 lines in total Total number of methylation call strings processed: 106296366 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1640740899 Total methylated C's in CpG context: 51775611 Total methylated C's in CHG context: 3402023 Total methylated C's in CHH context: 9182808 Total C to T conversions in CpG context: 310880667 Total C to T conversions in CHG context: 292209319 Total C to T conversions in CHH context: 973290471 C methylated in CpG context: 14.3% C methylated in CHG context: 1.2% C methylated in CHH context: 0.9%