Bismark

Bismark Processing Report

/gscratch/srlab/sr320/data/froger/trim/Mc/Meth12.fastp-trim.202003060645_R1_001.fastq.gz and /gscratch/srlab/sr320/data/froger/trim/Mc/Meth12.fastp-trim.202003060645_R2_001.fastq.gz

Data processed at 10:51 on 2020-03-09

Alignment Stats

Sequence pairs analysed in total 91925192
Paired-end alignments with a unique best hit 0
Pairs without alignments under any condition 91925192
Pairs that did not map uniquely 0
Genomic sequence context not extractable (edges of chromosomes) 0

Cytosine Methylation

Total C's analysed 0
Methylated C's in CpG context 0
Methylated C's in CHG context 0
Methylated C's in CHH context 0
Methylated C's in Unknown context 0
Unmethylated C's in CpG context 0
Unmethylated C's in CHG context 0
Unmethylated C's in CHH context 0
Unmethylated C's in Unknown context 0
Percentage methylation (CpG context) N/A%
Percentage methylation (CHG context) N/A%
Percentage methylation (CHH context) N/A%
Methylated C's in Unknown context N/A%

Alignment to Individual Bisulfite Strands

OT 0 original top strand
CTOT 0 complementary to original top strand
CTOB 0 complementary to original bottom strand
OB 0 original bottom strand