zr3534_9_R1.fastp-trim.20201202_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 37981246 lines in total Total number of methylation call strings processed: 75962492 Final Cytosine Methylation Report ================================= Total number of C's analysed: 906834456 Total methylated C's in CpG context: 11638273 Total methylated C's in CHG context: 720203 Total methylated C's in CHH context: 3089506 Total C to T conversions in CpG context: 104980361 Total C to T conversions in CHG context: 158340275 Total C to T conversions in CHH context: 628065838 C methylated in CpG context: 10.0% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%