zr3534_7_R1.fastp-trim.20201202_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 33973996 lines in total Total number of methylation call strings processed: 67947992 Final Cytosine Methylation Report ================================= Total number of C's analysed: 817176174 Total methylated C's in CpG context: 10367757 Total methylated C's in CHG context: 689165 Total methylated C's in CHH context: 3016470 Total C to T conversions in CpG context: 92626062 Total C to T conversions in CHG context: 140442001 Total C to T conversions in CHH context: 570034719 C methylated in CpG context: 10.1% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%