zr3534_5_R1.fastp-trim.20201202_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 42631307 lines in total Total number of methylation call strings processed: 85262614 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1011883701 Total methylated C's in CpG context: 14467262 Total methylated C's in CHG context: 867806 Total methylated C's in CHH context: 3772028 Total C to T conversions in CpG context: 114149271 Total C to T conversions in CHG context: 174285305 Total C to T conversions in CHH context: 704342029 C methylated in CpG context: 11.2% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%