zr3534_2_R1.fastp-trim.20201202_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 38089436 lines in total Total number of methylation call strings processed: 76178872 Final Cytosine Methylation Report ================================= Total number of C's analysed: 914393917 Total methylated C's in CpG context: 12156816 Total methylated C's in CHG context: 771853 Total methylated C's in CHH context: 3334418 Total C to T conversions in CpG context: 105012145 Total C to T conversions in CHG context: 158378687 Total C to T conversions in CHH context: 634739998 C methylated in CpG context: 10.4% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%