zr3534_10_R1.fastp-trim.20201202_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 39493884 lines in total Total number of methylation call strings processed: 78987768 Final Cytosine Methylation Report ================================= Total number of C's analysed: 944375423 Total methylated C's in CpG context: 12141084 Total methylated C's in CHG context: 735626 Total methylated C's in CHH context: 3178623 Total C to T conversions in CpG context: 109564471 Total C to T conversions in CHG context: 164759511 Total C to T conversions in CHH context: 653996108 C methylated in CpG context: 10.0% C methylated in CHG context: 0.4% C methylated in CHH context: 0.5%