Alignment Stats
| Sequence pairs analysed in total |
50675924 |
| Paired-end alignments with a unique best hit |
19762420 |
| Pairs without alignments under any condition |
26011820 |
| Pairs that did not map uniquely |
4901684 |
| Genomic sequence context not extractable (edges of chromosomes) |
854 |
|
|
Cytosine Methylation
| Total C's analysed |
702187735 |
| Methylated C's in CpG context |
11122944 |
| Methylated C's in CHG context |
563351 |
| Methylated C's in CHH context |
2209287 |
| Methylated C's in Unknown context |
4640 |
| Unmethylated C's in CpG context |
79862407 |
| Unmethylated C's in CHG context |
125026145 |
| Unmethylated C's in CHH context |
483403601 |
| Unmethylated C's in Unknown context |
474810 |
| Percentage methylation (CpG context) |
12.2% |
| Percentage methylation (CHG context) |
0.4% |
| Percentage methylation (CHH context) |
0.5% |
| Methylated C's in Unknown context |
N/A% |
|
|
Alignment to Individual Bisulfite Strands
| OT |
4968187 |
original top strand |
| CTOT |
4901333 |
complementary to original top strand |
| CTOB |
4914664 |
complementary to original bottom strand |
| OB |
4977382 |
original bottom strand |
|
|
