9_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 13133290 lines in total
Total number of methylation call strings processed: 26266580

Final Cytosine Methylation Report
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Total number of C's analysed:	403966364

Total methylated C's in CpG context:	1852141
Total methylated C's in CHG context:	713290
Total methylated C's in CHH context:	2820751

Total C to T conversions in CpG context:	57457894
Total C to T conversions in CHG context:	70506080
Total C to T conversions in CHH context:	270616208

C methylated in CpG context:	3.1%
C methylated in non-CpG context:	1.0%