7_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 14970900 lines in total
Total number of methylation call strings processed: 29941800

Final Cytosine Methylation Report
=================================
Total number of C's analysed:	474634361

Total methylated C's in CpG context:	2138808
Total methylated C's in CHG context:	813042
Total methylated C's in CHH context:	3208375

Total C to T conversions in CpG context:	67925371
Total C to T conversions in CHG context:	83088592
Total C to T conversions in CHH context:	317460173

C methylated in CpG context:	3.1%
C methylated in non-CpG context:	1.0%