5_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 9686169 lines in total
Total number of methylation call strings processed: 19372338

Final Cytosine Methylation Report
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Total number of C's analysed:	320045654

Total methylated C's in CpG context:	1397050
Total methylated C's in CHG context:	570232
Total methylated C's in CHH context:	2224804

Total C to T conversions in CpG context:	44701957
Total C to T conversions in CHG context:	55147296
Total C to T conversions in CHH context:	216004315

C methylated in CpG context:	3.0%
C methylated in non-CpG context:	1.0%