31_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 14051730 lines in total
Total number of methylation call strings processed: 28103460

Final Cytosine Methylation Report
=================================
Total number of C's analysed:	467888059

Total methylated C's in CpG context:	1992632
Total methylated C's in CHG context:	721685
Total methylated C's in CHH context:	2905328

Total C to T conversions in CpG context:	65547905
Total C to T conversions in CHG context:	80977286
Total C to T conversions in CHH context:	315743223

C methylated in CpG context:	3.0%
C methylated in non-CpG context:	0.9%