1_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 16392378 lines in total
Total number of methylation call strings processed: 32784756

Final Cytosine Methylation Report
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Total number of C's analysed:	508886308

Total methylated C's in CpG context:	2282855
Total methylated C's in CHG context:	930603
Total methylated C's in CHH context:	3602120

Total C to T conversions in CpG context:	72670677
Total C to T conversions in CHG context:	88731714
Total C to T conversions in CHH context:	340668339

C methylated in CpG context:	3.0%
C methylated in non-CpG context:	1.0%