13_R1_001_val_1_bismark_bt2_pe.deduplicated.bam

Parameters used to extract methylation information:
Bismark Extractor Version: v0.21.0
Bismark result file: paired-end (SAM format)
Output specified: comprehensive
No overlapping methylation calls specified
Methylation in CHG and CHH context will be merged into "non-CpG context" output


Processed 11771701 lines in total
Total number of methylation call strings processed: 23543402

Final Cytosine Methylation Report
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Total number of C's analysed:	355502119

Total methylated C's in CpG context:	1584752
Total methylated C's in CHG context:	643079
Total methylated C's in CHH context:	2543241

Total C to T conversions in CpG context:	48356060
Total C to T conversions in CHG context:	60555610
Total C to T conversions in CHH context:	241819377

C methylated in CpG context:	3.2%
C methylated in non-CpG context:	1.0%