zr3644_8_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 14242845 lines in total Total number of methylation call strings processed: 28485690 Final Cytosine Methylation Report ================================= Total number of C's analysed: 336126373 Total methylated C's in CpG context: 5237785 Total methylated C's in CHG context: 267711 Total methylated C's in CHH context: 1067626 Total C to T conversions in CpG context: 37832107 Total C to T conversions in CHG context: 58950807 Total C to T conversions in CHH context: 232770337 C methylated in CpG context: 12.2% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%