zr3644_23_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 13580699 lines in total Total number of methylation call strings processed: 27161398 Final Cytosine Methylation Report ================================= Total number of C's analysed: 319217422 Total methylated C's in CpG context: 4796647 Total methylated C's in CHG context: 251840 Total methylated C's in CHH context: 1001795 Total C to T conversions in CpG context: 36244726 Total C to T conversions in CHG context: 56117649 Total C to T conversions in CHH context: 220804765 C methylated in CpG context: 11.7% C methylated in CHG context: 0.4% C methylated in CHH context: 0.5%