zr3644_22_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 16001443 lines in total Total number of methylation call strings processed: 32002886 Final Cytosine Methylation Report ================================= Total number of C's analysed: 384123373 Total methylated C's in CpG context: 5860168 Total methylated C's in CHG context: 306457 Total methylated C's in CHH context: 1207901 Total C to T conversions in CpG context: 43577975 Total C to T conversions in CHG context: 67741077 Total C to T conversions in CHH context: 265429795 C methylated in CpG context: 11.9% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%