zr3644_21_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 16594940 lines in total Total number of methylation call strings processed: 33189880 Final Cytosine Methylation Report ================================= Total number of C's analysed: 399488670 Total methylated C's in CpG context: 6100968 Total methylated C's in CHG context: 311854 Total methylated C's in CHH context: 1238820 Total C to T conversions in CpG context: 45081646 Total C to T conversions in CHG context: 69907149 Total C to T conversions in CHH context: 276848233 C methylated in CpG context: 11.9% C methylated in CHG context: 0.4% C methylated in CHH context: 0.4%