zr3644_20_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 16178353 lines in total Total number of methylation call strings processed: 32356706 Final Cytosine Methylation Report ================================= Total number of C's analysed: 392050055 Total methylated C's in CpG context: 5957717 Total methylated C's in CHG context: 310331 Total methylated C's in CHH context: 1231939 Total C to T conversions in CpG context: 44300730 Total C to T conversions in CHG context: 68625359 Total C to T conversions in CHH context: 271623979 C methylated in CpG context: 11.9% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%