zr3644_1_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 17025672 lines in total Total number of methylation call strings processed: 34051344 Final Cytosine Methylation Report ================================= Total number of C's analysed: 393879492 Total methylated C's in CpG context: 5522806 Total methylated C's in CHG context: 295264 Total methylated C's in CHH context: 1171018 Total C to T conversions in CpG context: 44827263 Total C to T conversions in CHG context: 69333931 Total C to T conversions in CHH context: 272729210 C methylated in CpG context: 11.0% C methylated in CHG context: 0.4% C methylated in CHH context: 0.4%