zr3644_16_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 16957597 lines in total Total number of methylation call strings processed: 33915194 Final Cytosine Methylation Report ================================= Total number of C's analysed: 382781966 Total methylated C's in CpG context: 5910985 Total methylated C's in CHG context: 296157 Total methylated C's in CHH context: 1171795 Total C to T conversions in CpG context: 43275050 Total C to T conversions in CHG context: 67314545 Total C to T conversions in CHH context: 264813434 C methylated in CpG context: 12.0% C methylated in CHG context: 0.4% C methylated in CHH context: 0.4%