zr3644_15_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 19595048 lines in total Total number of methylation call strings processed: 39190096 Final Cytosine Methylation Report ================================= Total number of C's analysed: 468134760 Total methylated C's in CpG context: 7640366 Total methylated C's in CHG context: 369842 Total methylated C's in CHH context: 1479955 Total C to T conversions in CpG context: 52140889 Total C to T conversions in CHG context: 81627664 Total C to T conversions in CHH context: 324876044 C methylated in CpG context: 12.8% C methylated in CHG context: 0.5% C methylated in CHH context: 0.5%