zr3644_13_R1.fastp-trim.20201206_bismark_bt2_pe.deduplicated.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.21.0 Bismark result file: paired-end (SAM format) Output specified: strand-specific (default) No overlapping methylation calls specified Processed 17662731 lines in total Total number of methylation call strings processed: 35325462 Final Cytosine Methylation Report ================================= Total number of C's analysed: 427676475 Total methylated C's in CpG context: 6502393 Total methylated C's in CHG context: 335205 Total methylated C's in CHH context: 1334605 Total C to T conversions in CpG context: 47981015 Total C to T conversions in CHG context: 74622637 Total C to T conversions in CHH context: 296900620 C methylated in CpG context: 11.9% C methylated in CHG context: 0.4% C methylated in CHH context: 0.4%